YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22550395, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMVLLLGF LLATLQITGV KSVGVCYGML GNNLPPASQV VALYKSRNID RMRIYDPNQA  60
   61 ALQALRGSNI QLMLGVPNSD LQGLATNPSQ AQSWVQRNVR NYWPGVSFRY IAVGNEVSPV 120
  121 NGGTSRFAQF VLPAMRNIRA ALASAGLQDR VKVSTAIDLT LLGNSYPPSQ GAFRGDVRGY 180
  181 LDPIIRFLVD NKSPLLANIY PYFSYSGNPK DISLPYALFT ANSVVVWDGQ RGYKNLFDAM 240
  241 LDALYSALER AGGASLEVVL SESGWPSAGG FGTTVDNART YNSNLIRHVK GGTPKRPGRA 300
  301 IETYLFAMFD ENKKEPQLEK HFGLFFPNKQ PKYSINFSGE KPWDVSSEND TNEESLKSDI 360
  361

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	360	0.99