YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41152668
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLVLLMVS ALLVAFAATA FAADGSWNRV KSAGKLVIGL DDAFPPMGYR DASGKLIGFD  60
   61 IDAAEEVGKR LGIKIEWQPT AWDGVIHSLN SKKFDAIWNG MTITDERAKQ VAFTKPYIMD 120
  121 GQIAVVKFSE KRFKKIADLK NVKIGAQKGS SALNAVKKLP TAPAELKEYE DNPKALLDLE 180
  181 AGRIDVVVID NVTGRDFIAK RPGQFKVVPG FISKEPFGVA FRKEDKELRE KVQKTLDKMV 240
  241 KDGSLAKISR KWFAEDITNP KKW

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	263	0.99