YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38176548, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKALALCL ALVTVPAIGA TTESSPPPSI DAYLSPKTID KHGLNDTLWQ LLNDAGQTVG  60
   61 FRGGKAQRAW ELQQALNGQN DTLNRLYTFA PLISRQGWLP PVIVASESLA HITDSQIRTA 120
  121 NKVYNILVPE RFVSNPPTWR QYLLAGLGIN TDIPTEIRPK NGDEEKVWRA AIEKGWQEGR 180
  181 ESADRTLESN FGRLTRDYTG MVRYSTLVQQ GMITPPVVSE QLQSVTGSKD KLMLGDKVRD 240
  241 LKQRAGFELD KKRWKPTINT QQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	262	0.99