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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18073451, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.54
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFKNTLAAL TAASALFSTV KADDLPPIEI VGNKFFFSNN GSQFYMRGIA YQADTANATS  60
   61 GATINDPLAD FSSCSRDIPY LQQLATNVIR VYAVNTSLDH DECMKALNDA GIYVIADLSA 120
  121 PKTSVNRDSP SWDLELYERY TSVVDMFANY SNVLGFFAGN EVTNNSTNTD ASAFVKAAVR 180
  181 DTKQYIKSKG YRKIPVGYSS NDDADTRVSI ADYFACGDED QRADFYGINM YEWCGNSNLQ 240
  241 KSGYADRTKE FSNLSIPLFF SEYGCNEVTP RLFTEVQALF GDQMTDVWSG GIVYLYFEEE 300
  301 NHYGLVSIDG NDVKTLDDFN NYSKQIHSIS PSSANTASYS ASSTSLSCPT SNSYWKASSN 360
  361 LPPTPDKDLC LCMDDANSCI VADKVDEDDY KDLYGYVCGE IDCSGITGNG TTGKYGSYSF 420
  421 CSPKEKLNFV LNLYYQSKGG SKSDCDFSGS ASVRSATTHA GCASALKEIG SVGTNSATDS 480
  481 ATYSGSGTGS MSTSKASASG SSKGSSSAKS GSASGSSSSS SRSATSSSKS NKKNAGVNLK 540
  541 TDLFQVIATS VISISMLAGL GFVLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle