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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49529242
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSNALLAL PLLLTQCLVN AEELSADRIN GTEIESSKIQ SYNKSEARKD HDAAAAYNEK  60
   61 YIHPVKANGG VVSYPYKEEL DLQPLPRNHL RSSFHFDIES EAFDPTKSAN DFEEYSHYTV 120
  121 FPKSIDPLLK RTGTRQMHLR FTRGLWDSET WGKLPYDGFK SGGSGVELWA VIEAENREAA 180
  181 YNQWKSLANS LSGMFCASIN FIDKSRTVFP VSPSQFSVKS EHDHKAIPIF NTTNELYLLH 240
  241 ASLANEPICT ENLTPLIKLL PTKGKSGISS LLDGHKVFDS IWHSMSIDID TTCDEVNGIC 300
  301 KFEMEAIVDM VMNTPQSLRR GTNPIPRPLS ASELRCDLSK PHDDFMCFPL PEKTDYSFDI 360
  361 SQIFGKKIIG TNQLSHYPSK LCAIITGSWK SFVSVGEDLY ATENNCFELH EQVDHDLYFE 420
  421 TKNSTDVIDN GDSPIFVSRS LTGYGQDHGG LRTVFKNPYN HDVKLVYFES LPWYMRVYLS 480
  481 SLKLESSNSL HLSDVIKSTH YEPAKDRLRP THVEFEITVP ANTTFALSYQ FDKAILQFEE 540
  541 YPPDANHGFE VEAAVITVTE PIHYQLRTST LLLYLSTPDF SMPYNVIIIT STVIGLIFGM 600
  601 LYNMMVKRMV TLEEADRIME KRSIKYRLKQ FKMALLKKIN GNRKKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle