YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50294450, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVGKNESL SAQAYQLTAT PYPAVVNGLA LLATPMVSPQ MSATAGMTSP ASSAKGVMKN  60
   61 VLSMPSSRNS TRTIGPSNKA AMLFGGAQLL GAYIINDGDL ENGAGFVTAW SALYMIVSGK 120
  121 GSVKALRYGR VWPLALSTLA LGNTVLYGRR FLFSDFK

Type	Start	End	Confidence
Cytoplasmic	1	74	0.64
Transmembrane Helix	75	95	0.68
Non-Cytoplasmic	96	102	0.74
Transmembrane Helix	103	123	0.69
Cytoplasmic	124	130	0.66
Transmembrane Helix	131	148	0.81
Non-Cytoplasmic	149	157	0.60