YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50293931, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKQSDTEV EGETIVKQDA LTTKHPDVEF HPMLKQTIEM WCKSGIRDTY DNKCFKRDVL  60
   61 SRISEITSIM SQIAEESNGG NSDKCRINDG VYRLDWESVY EVGASIMDQY SATVDELLAD 120
  121 LDKLYRVCVF NFLYTTTERL VMLFILLTQV IILITIISCN LNQFRNNICG KTPQCFSTPL 180
  181 KVLP

Type	Start	End	Confidence
Cytoplasmic	1	139	0.52
Transmembrane Helix	140	159	0.81
Non-Cytoplasmic	160	184	0.63