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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50293025, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSIIASDK SVKSLPQTSL NQSEMNGDYS NEQVDERQLA VSTNTTVENE REPLINVPES  60
   61 KRNIGGRYSS NECVNREAHD NDNPALAVAH NIQDKLYQMH KDYRVFIHNS KWILNLMILL 120
  121 NTIWLVITFI NDFFFNMSLF GYSNRYGSFN DLCLIFVAIV ANSLNLWFNQ LGLYSSLDVV 180
  181 QNISLCLLTL FNLFLLLIVK YTRERIGSIA IFTYLWTAFA FVIGSVLDFY LLKFNDELYK 240
  241 NNNIIAERET QGHEQYDNKH TLREWLYIAI RSVAKLGLLI FMAFYTLNTL LTAWDISRTS 300
  301 NTVVSSYPSQ MVFTEAASYE NYHWVDDNHT YKIHITCYGD IFNNTDLDND NNQAIVLFEH 360
  361 GGYDTGYRSG TWIQELYHLN RIKRFCMYER PGYGLSDSPP APISISMVAE GLKYALLNEA 420
  421 KIKGPFVTVG YDMGGLFTRV FTAKNIDIVQ GMMLVDAWHE DLLLKNYLKR MLPPVDDDDP 480
  481 SRNPDDRSWL PQEIGRHNEF KLWWQGLWST LGLRLQSSWL VAHHGSRDRI FGRDLPYQGR 540
  541 FLRAKFLESI TSSILSYRDV INSNDRLIDV KTSIVSSKDM VKKSYRWGNW QRELTKISRK 600
  601 TQEWKVVDGG HEVYKYNLGK QQTQDVLLRL VGEKDRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle