YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49528228, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFVSAILMA SAVLAAPAVQ HQDKHAHEKR DLVVVTEYVD QDGNIFTPTE VVNDAPAATP  60
   61 TPAPAAAPSS AAPAAPAASP AKDTTTLAPS SSKQQASQPT TGSSFTGGAF QDGTIPCSQF 120
  121 PSGNGVVALD WLNMGGWASI MDLNGNTASS CQEGFYCSYA CESGMSKTQW PSNQPADGRS 180
  181 VGGLYCKGGF LYRANTNANT LCEQDAGTAF AENQVGQSIA ICRTDYPGSE NMVIPTVVGA 240
  241 GSTQPISVVK EDSYYQWKGM KTSAQFYVNN AGVSVENGCI WGNEGSGVGN WAPVVLGAGE 300
  301 TNGITYLSII PNPNNRTPPN FNVKIVATDG SSVNGACKYE NGVYSGSGSD GCTVSVTSGS 360
  361 AKFVFY

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	366	0.99