YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49528032
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEVAVGSAL RRALESAVEA AVAAGDGDAK VRLLELIERG SVPCGELAEL CRAWGSEVSV  60
   61 SEALSGLEFK FKDRETRKPS PEFQAQLARL RALQQEQEYQ QIVKNRDLAI TTESEATPAQ 120
  121 INREIKEQVT TVFNIIISVI SVVVAIWYWS RTSAGLAIHH RIFLCMFFGI LVLVAEVVVY 180
  181 SSYLSKIEEA KASEKSKKEH KKLVQKYVF

Type	Start	End	Confidence
Cytoplasmic	1	129	0.90
Transmembrane Helix	130	150	0.94
Non-Cytoplasmic	151	157	0.80
Transmembrane Helix	158	180	0.90
Cytoplasmic	181	209	0.85