YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49527971
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPFRYTRA QLEIFRFSFC LLAPVAVMYY IGTDTDKKLN VPGFWPDPES LNQIPKEPYE  60
   61 IKAELARMKK ERLEKRLKLE KRLKEEFGLD VEAEKAKMRE ELGLTSKTE

Type	Start	End	Confidence
Cytoplasmic	1	13	0.74
Transmembrane Helix	14	32	0.83
Non-Cytoplasmic	33	109	0.94