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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49527888
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAHVPEVGH KYINDYNGYT YNIHTFLYDL IVFLFNAVIT TFFREIKVRG GYNVPPRGVP  60
   61 TILVCAPHAN QFIDPTLVMI TTRQLGYIRG KLRSRQACFV TAASSLKMKF VGLFGNAMGS 120
  121 IPVPRIQDNL KDMDSNLIIY APDFENNPTM LKGKCLDGSN PGFTTKFTVK SLIGLPNYLS 180
  181 NANIAEIPDD STIVLSAPFK NDKNGKVAEL LTQGTTFKYA EKIDNTETFQ SVFDHLHTKG 240
  241 CVGIFPEGGS HDRPSLLPIK AGVAIMALGA AAADPKMEVA VVPVGLHYFH RNKFRSRAVI 300
  301 EYGEPIMVNG DMGKEYKQQP RETVSRLLKK VSDALFTLTE NAPDYETLMT IQAARRLFQT 360
  361 NNSRIPLPAV VEIQRRLLVG YKKFQSDPRI MHLQNSVKEY NNKLYSMGLK DHQVMSLKTK 420
  421 PYETLRCAVT LLQRIFRVTL FFFLSLPGSI MFLPIFVGSH FYSKKKQREG LKKSSVKIEG 480
  481 KDLIATWKLI VALLMAPSLY ITYTIILMVL HQRRSKYVWW VWVPTENKVI QFIYFYMLLV 540
  541 LVAYSSLKTG EIGFDLFKSL RPLMISLVYP QDYIHELQTR RKELSNEVTE ICNELGPQVF 600
  601 PDYEKFASSY LIKKDKKDES KPEKDYLSQN STGLSGRSRS SSIYSMISNV SNSLSRVNSR 660
  661 GSLTDVPIFS DSRQGEWTNI TSDDEQSNSK EETPTNKLSS KITDLMRSKR EKEKVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle