YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50291957, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPELITTT KCIGVTSLGL YAGLLTSTSL ITSATPLDVL TGSLKNLLCK IGCWATAFGS  60
   61 VSTISLAVSY FLSEKPQRSN TRLAGALIAP ITGLYLYASS LANHGCCPSK AKESGLPEGH 120
  121 PQVGADAPVC PFSKTTDGSN GSFHKGSIKS DKCYNALLCH LTVVTLTTCG VFAKSVFDGF 180
  181 QGLL

Type	Start	End	Confidence
Cytoplasmic	1	11	0.73
Transmembrane Helix	12	34	0.76
Non-Cytoplasmic	35	50	0.64
Transmembrane Helix	51	72	0.91
Cytoplasmic	73	155	0.63
Transmembrane Helix	156	176	0.54
Non-Cytoplasmic	177	184	0.72