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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50291715, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDALANFNV TEVPSLKTSV REAMSTLNTT TVNLALGLPG MFSTFNAGQL YRIRVVAITA  60
   61 SALSIFGGVV GIYCMLNIDK RRKVFRHDLI LFLIICDFIK ALILMIYPAI ILNNNYVYAT 120
  121 PAFFNTLGWL TAYATEGADI AIMVFAIHFA LLIFKPNWKW RNAKTGNMEG GLYKVRGYIW 180
  181 PMTALIPSVL ASLAFINYNK LHKWTQAERD AVVLDNNNYD FPFKPRIGGY KPWSAWCYLP 240
  241 PRPLWYKIVL SWGPRYFLVI TIIAIYISIY LYVSSKIRKI KNQLKDFKHE QEEARHEEDR 300
  301 ILRSSKFGTI KWLMKRYISP LFMGIIKSFK NFFTLSMEDI SDDSELSTRS YSIYSSGSSY 360
  361 AYGANKADNE DYDKYHQGLQ ILKYKNSKNA QERNAVREQI QNQNQDQVEN KAEDKDIEMA 420
  421 DLETPKETFN NPLSKLSSLR KHMSIHSTDR RSGHSRRFSD ASDESNIDSL LENGLTEIFS 480
  481 TPIPDGEDSE TQNPVAYQME DLSKGISPMD NSVVPPLGDE RRIVGANEID DVKKNFQREM 540
  541 YQNMKKRRSQ IQKNVRSIFI YPCSYLALWV FPIIADCLQY NYEEKHGPVM WVTYLDTFTR 600
  601 PLACIVNSMV FFYREKPWRH TWERVEKKVL LDKFILKGEM SEQDMLFYRK TKLGRRGWYY 660
  661 RGKWLKRQCW SHQKEWWKRC LWYVYRTFIG AFKLDFDYED NCWDNEFWDQ YYSGKPLPEF 720
  721 RSHQNAKEGK MRSTETENVL TSDSSLSPSR EDAFYDAQDK LKISAFWMLV HLFPMLNGVD 780
  781 LDEINRVLRM KYKEDDFVIP GLTYALTQRN AQVPTPQVAA GKHSRNPSTI RNTNTKLPTF 840
  841 DLRTQQIPSS DEHHYMRETP KIDEHLFSNR NSQVSFARLD TDRPTSTVSE STSKQTTPPA 900
  901 STSVSQPSNH DDDDEHIDIL AFLNEPLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle