YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49527132, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLQQLTGG VHSAVTNMAP GYLPKWLLFI SIVSVFNSVQ TYISGLELTR RVYENKPSET  60
   61 TSLSARTFGT WTFVSCVIRF YGALYITEPH IYQLTFISYI IALFHFGSEL LIFRTCKLGK 120
  121 GFMGPLIVAS TSLIWMYNQK EYYTGLPW

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.80
Transmembrane Helix	26	46	0.84
Cytoplasmic	47	62	0.91
Transmembrane Helix	63	83	0.86
Non-Cytoplasmic	84	90	0.74
Transmembrane Helix	91	113	0.85
Cytoplasmic	114	117	0.87
Transmembrane Helix	118	138	0.80
Non-Cytoplasmic	139	148	0.85