YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49526656
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTINIAFRR FWQSETGPKT VHFWAPTLKW GLVIAGLTDI NRPVDKVSGA QNLSLLSTAV  60
   61 IWTRWSFVIK PKNMLLASVN SFLTLTAGYQ LARIVNYRLR NGDTIQQTFS YILNGAGNRN 120
  121 NEKLIQE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.62
Transmembrane Helix	21	38	0.54
Non-Cytoplasmic	39	127	0.48