YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49526461
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNFNDSSYG YLKSNNYGKD LNNNLWKLSG ILNSTIFETI NSTNQLLHDK AYSCVANLFS  60
   61 GGIVSSADND LNSGALNYTA KSPLVFIHCS NNTNDKNSVI LENIMQNAVR NISDLMTYEG 120
  121 LGSGTVLAKT DKFYLGMLLI CFGQISICIA YWMLFTVVVL LPADDHNRQN KLVLIFVLFS 180
  181 AITEAIILNR TVINVIQPQY YNNYQRSEEY ESIIINSNLV KSCDLIYSVF THFNWLLIII 240
  241 YMYPTVSLKW VEHVKKLPNG VRHFKHYHIC LAIILMLIDD ILFCLLLWTN TKPSIHVAFK 300
  301 SFEIIIYTIF CLLLVYFVWS NFAFVLRPKV QKGGCDIDTS ETSSKFTTTN ETCDNCEKAS 360
  361 YSFANKSQNI FVVVMKKGLR LVFYLFNGFF NYFKWSYYHL KVLWKDYQDI LPLLAYNIVL 420
  421 FGLSYWATIF FTMGEYYHRR WAYNIVYFLR ALITVNVWAL IGVLEKKKII ASRKTVLGRQ 480
  481 IRTNSFNENR DITTLGDHFI SREDNNINSG GLISDFYIDK ASPRVSPQRN SGEIYESSSA 540
  541 NKITPHLNTA KYLLRAYPGA RRKKKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle