YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49526357
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPMPQGLAQ QQPSNWDKFK MGLMMGSTVG VCTGVLFGGF TILTQGAGPD GIMRTLGKYI  60
   61 AGSAATFGLF MSIGSIIRSD SEMPMSLQQT QDLQRRARLE VWKVRNLYGL SRN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.86
Transmembrane Helix	21	43	0.93
Non-Cytoplasmic	44	55	0.77
Transmembrane Helix	56	77	0.90
Cytoplasmic	78	113	0.86