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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49526298
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEPDKKRKR SWSLRTQMFN KHLFENYHND DNVEMNDIDE ETENDEGHIG DFNSIDGQTK  60
   61 IRNHQSPRLV TKILDMLFDR RTQVHSVDGR HIPISLDHSS AISDIYPVDR HGNLVDERYG 120
  121 YAYCNNLITS SRYTIISFFP RQLYAQFSKL ANVYFFIVAI LQMIPGWSTT GTYTTIVPLC 180
  181 VFMAISMARE AYDDYRRHKL DKEENNKLTK VLQILHERED NDLDLENNAQ HSANNPESIS 240
  241 NLYFNNFDLL AKKYNVRIVE KKWKDIRVGD FVLLQQDDWV PADILILTSD GDNSEVFIET 300
  301 MALDGETNLK GKVPHPEINK LTKSASGLAN INAQVTVEDP NNDLYNFEGN LELNSGSSSK 360
  361 KKYPLGPDNV IYRGSIIRNT RNCVGMVIFT GEESKIRMNA LRNPRTKAPK LQRKINMIVV 420
  421 FMVFVVACMS LFSYLGHTIQ IKRYVNNNKA WYLLQEDAGT APTIMSFIIM YNTIIPLSLY 480
  481 VTMELIKVAQ SRMMEWDIDM YHAESDTPCA VRTATILEEL GQVSYIFSDK TGTLTDNKML 540
  541 FRKLSFCGTS WVHNATQDIS EFKPAQLSNK NDIDVISIDD QSFLSKLGYT SQSNPKRYMD 600
  601 INDFPDRRTS VEYKGNATVK YTGRPSMRSL YVPPKKETNA SNSQDASDIP EDIKSTFELI 660
  661 YYIQSNPKSL FAKKAKMFIL SLAICHICLP KRTEEGNDED DIIEYQSSSP DELALVTAAR 720
  721 DMGYIVYNRN ANILTLKTFP DGFDELPRFE NFEILELVDF NSQRKRMSVI VRVPEEKDRV 780
  781 LLFCKGADNV ILERLHNKEM ALDMLDQVEN NTKYRKDAEA ELVIQHRKSL ERAVNDDLPR 840
  841 TSLRNSISRG PRESLSLQAA RKSMSRKSNQ LQDPEMQLGT IDQFLDSVQK TDKEIDAVVS 900
  901 QARKSLAKQR LEKYGPRLSM DSPQIVAAEK SPQVSNGNDV LLNYIGSDAL ISNEEYVLEK 960
  961 TLEDIESFST EGLRTLLFAH KWISNEDFEQ WRTRYHEAKT SLSERKQKID EVGAQIEDEL1020
 1021 YLLGATAIED KLQEGVSEAI EKIRRAGIKM WMLTGDKRET AINIGYSCKL IHDYSTVVIL1080
 1081 TTSDENIISK MNAISQEVDS GNVAHCVIVI DGATLAMFED NPTLMSVFTE LCTKTDSVVC1140
 1141 CRASPAQKAL MVSNIRNTDK SIVTLAIGDG ANDIAMIQSA DIGVGIAGKE GLQASRSADY1200
 1201 SIGQFRFILK LLLVHGRYNY IRTAKFILCT FYKELTFYLT QLIYQRYTMF SGTSLYEPWS1260
 1261 LSMYNTLFTS LPVLCVGMFE KDLKPVTLLT VPELYSMGRL SKAFNWSIFA EWVFLGTANA1320
 1321 LIITFLNIVA WGETSLSDNT LYPLGFVNFS ATVALINVKA QFIEMRNRNW LAFTSVILSC1380
 1381 GGWLVWCCAL PILNRSDGIY DVTYGLYHHF GRDITFWCTS LILAVLPIIV DVVYKTFKIM1440
 1441 LAPSDSDIFA ELEQKSEIRK KLELGAYNEM KQGWTWTQDQ STFDKYKDIV FNRSRSASSA1500
 1501 TEVNSMTNLA HGNSEDDQYL SSRFANDDIH TSYSGNSATS PPKPTRGNSL KLLSLNITGN1560
 1561 SRSSEEYEVL PSGKLIKRQS TELQKATNNS ENMASKLTKK LRFKMKDEED DEEIDRIIRD1620
 1621 RMKDLE

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