YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50289017, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPVQRAAT RSIIQKYINK ETLKYVFTTH FWGPVSNFGI PIAALYDLKK DPTLISGPMT  60
   61 LALVAYSGVF MKYALAVTPK NYLLFACHFI NESAQLGQGY RFIDFNYFKS DEEKNKIIEE 120
  121 YKVKAEQANE KK

Type	Start	End	Confidence
Cytoplasmic	1	25	0.63
Transmembrane Helix	26	45	0.60
Non-Cytoplasmic	46	53	0.80
Transmembrane Helix	54	75	0.64
Cytoplasmic	76	132	0.61