YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49526131
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILSAQNLI LLRSALLLTI AFFCIKNVNS ILQNSFFLVL SQAMELPALS MSQYSGQLGM  60
   61 FSMLFFFAAL NDLVPLMEDN KTYFRSIVPV RLTVFFIIGA IAYLWTENLY FHNNAVFIYC 120
  121 FIEIWINFLL LNAVREERNE EFKREHRFMN DDLIEEPAPF EKAE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.97
Transmembrane Helix	9	30	0.88
Non-Cytoplasmic	31	53	0.85
Transmembrane Helix	54	74	0.89
Cytoplasmic	75	86	0.82
Transmembrane Helix	87	106	0.94
Non-Cytoplasmic	107	114	0.82
Transmembrane Helix	115	134	0.94
Cytoplasmic	135	164	0.98