YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPN3_CANGA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVGLLVLG PAGAGKSTFC NSIISHMQTI GRRAHIVNLD PAAEPSKYEF TIDIRDLISL  60
   61 DDVMEELDLG PNGALIYCFE YLMKNLDWLD EEIGDYNDEY LIFDCPGQIE LYTHIPVLPN 120
  121 IVRHLQGQLN FNLCATYLLE APFVIDSSKF FSGALSAMSA MILLELPHIN VLSKLDMIKD 180
  181 EYGKKKLKRF LNPDAMLLAN EADQNLNPKF HHLNQCIANL VDDFGMVQFL PLEANNPESV 240
  241 ATILSYVDDV TQWAEAQEQK EPKDQIDIED L

Type	Start	End	Confidence
Signal Peptide	1	20	0.83
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	271	0.97