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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYGM2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILHFSLPL IVSFLRPHAS PRFFLLPRSL SQSPFLSRRR FHRTSAVSSA AVHHQSYRNP  60
   61 DDDVTRAVSV PTFQQAIQRL QEYWASVGCA VMQPSNTEVG AGTMNPCTFL RVLGPEPWNV 120
  121 AYVEPSIRPD DSRYGENPNR LQRHTQFQVI LKPDPGNSQQ LFINSLSALG IDVTAHDIRF 180
  181 VEDNWESPVL GAWGLGWEIW MDGMEITQFT YFQQAGSLPL SPVSVEITYG LERIIMLLQE 240
  241 VDHFKKILYA DGITYGELFL ENEKEMSSYY LEHASVDRLQ KHFDYFDEEA RSLLALGLPI 300
  301 PAYDQLLKTS HAFNILDARG FIGVTERARY FGRMRSLARQ CAQLWLATRE SLGHPLGVAS 360
  361 EPVPPVCHRA ALEKVAEKVS EDPRSFIIEI GTEEMPPQDV INASEQLRVL VLELLENQRL 420
  421 RHGAVKAFGT PRRLVVLVDA MSSKQLEEEV EVRGPPASKA FDDEGNPTKA AEGFSRRYGV 480
  481 PLEKLYRKVS GKTEYVHARV TEPARLALEV LSEDLPGILA KISFPKSMRW NSSVMFSRPI 540
  541 RWVMALHGDL VVPFSFAGIS SGNVSCGLRN TASASLLVQN AESYEDTMRN SGINIEIEER 600
  601 KKIILEKSNA LAKSVSGRLV VPQNLLNEVA NLVEAPVPLI GKFKESFLEL PEELLTIVMQ 660
  661 KHQKYFSIID ESGQLLPYFI AVANGAINED VVKKGNEAVL RARYEDAKFF YEVDTRKRFS 720
  721 EFRDQLQGIL FHEKLGTMLD KMNRLKKMVS KLCLALKIDE DLLPVVEDAA SLAMSDLATA 780
  781 VVTEFTALSG IMARHYALRD GYSEQIAEAL LEITLPRFSG DVIPKTDAGM VLAIGDRLDS 840
  841 LVGLFAAGCQ PSSTNDPFGL RRISYGLVQI LVEKDKNVNF KRVLELAASV QPTKVEANTV 900
  901 EDVYQFVTRR LEQLLVDNGV SPEVVRSVLA ERGNNPCLAA RTAYKTEKLS KGEMFPKIVE 960
  961 AYSRPTRIVR GKDVGVGVEV DENAFETPQE RTLWSTYTSI KDRIHTGIEI EDFTEISMQL1020
 1021 VEPLEDFFNN VFVMVEEERV RKNRLALLNN IANLPKGVID LSFLPGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle