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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49525489
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIDSQVVLK LDAIDKQLSQ ALQVLLVQGI EDSQQLQSLQ RSLYSIKKIV DDLVNRLSRQ  60
   61 NSTKVYIDLQ KVLDTLENAC IDTLGDSKVL DLFKNALVQY TIVIAYYDLL SDSLVSLPQA 120
  121 YDALDYYNSI SASRAKSWYY GLQCMVPRFI KHSYENKTEL LRPRMDLIML RNFQFVGIAK 180
  181 HRNELLTKPW RYLNVLVHLP LSVIRDDLSK KLAVETELVN EHTIKLGELL DDFNSSIDTN 240
  241 EDMDNHISRL SSHLNVEGQP VDSLTRLKLI VLNIKELQEQ KPNTLVKKPN FISRNWPVLL 300
  301 VGLLYGPSSI IAVWQSRYKI LEFLQHNVVD FVTGLMYNWV YTPLKQVWAT VRHDEGSAIS 360
  361 VTSQSTLDSE MSSLSRMIVS FVVENSDHRE LINENQLISQ VEHGDLTQFL KIYETQLSHP 420
  421 IKNIVTGSLV RSLLIQVQKT KVDGSLALNG IDKMLKSQQL VFGILAMSPA LAIIYTSFVA 480
  481 LKRFVKLGSV WSNIQKYKYR ISVSLNNIER IINDFKDTET GAISKGKDEY LKEGLLLIEI 540
  541 STLHELGKKI VPKKRISEWC RDVQELMTHS KSSRQTHLNV VNRIYHVYGR YL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle