YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMM1_CANGA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSALEVKSI KDSNETLISL DDYIRNTLPS QLHEILLEEF QNQDFSRGQD VSNSTHDQMI  60
   61 DHTLELTSDL LRNALDKQLM EVQSRTLPVR QSNQLISWSF AQGLIIGQLS VVIFLIFFVK 120
  121 FFIFTDASSK MDNPLPSKVS KSYLKNRRES SSIKDKRKGV LVKEESGETD LHGSLQLNDI 180
  181 LEKTYYNVDT HSAESLDWFN VLLAQMIQQF REEAWHKDNI LTSLDSFIQK RSSDLPDYLD 240
  241 KITITELDIG EDFPIFSNCR IQYAPNSSDK KLEAKIDIDL NDKITFGMST RLLLNYPKKC 300
  301 TAALPIDLAV SMVRFQACLT VSLITAEELE FTTGNKIDDN EKNGYYLVFS FTPEYKIDFD 360
  361 IKSLIGARSK LENIPKISNI IEYNIKKWFA ERCVEPRFQS VKLPGMWPRS KNTREEVIHK 420
  421 TEDESSKTPH S

Type	Start	End	Confidence
Cytoplasmic	1	97	0.81
Transmembrane Helix	98	119	0.87
Non-Cytoplasmic	120	431	0.84