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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50285819, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGSQILDK SVPDWKLNNI DYEELKKIIK QVTSKKTAPN SNDFEGLEVS FKQNIVQINL  60
   61 FVSLKLKEIS SKLVSIEHSI TKLLDNEIND NRKVLRRIKT IKNYLETCND LLQKLSRFVI 120
  121 VQRIALRKLF KKITKHYGDK KIAQQFISSI QNCNELRDGY EGVSFKNLDL QSYLVEVSLI 180
  181 MDILTDMTNA IKSTGNFKDL PSELFEKSKL ITNATDNKKP LVSFTTNQQF DQVLWDKGEL 240
  241 IQSLLVRSDN NEQLKFLLIT LGFQVFDQNL QGISRDIIAS EPNSEVRSLR SKKSFYESDR 300
  301 PALKRLHTSS TEYLNNAEEM EQSKCKAVML TPSGKVDSSI YDSKKITSYP SVLLEYEKNN 360
  361 VIANECIVIC HVGGLRGKVV TDKLHINEIS EYLKNSNKQA ISDPLAKIAL DWICDHGMKE 420
  421 CGIEIGFKRT RYFCNKHSNL YMITIDEEFT LSDSNGQTEK LMDHSIIDLR VVTTNFSSDN 480
  481 KSLAKKSQEI YEKIISSKIQ CFPFQPDFHP VKLLLSIHEN NGSKDVIHRL MLENIYELNE 540
  541 NNKITEDEFF GIGFDLLLDI CSSEFKDNYY QKVESPTRTP NDWKKNNLLS KNKNTENNKP 600
  601 AIRYWNEFDD LEEENGGGGF YIQDRTDDLE SNELQQERDY GFIHFSKDFI ESTYSSLQSF 660
  661 RDFLGFKDNN RTAIDPALLD LSERFGNSNY GSISSKGSIL SNSVEDIRKL IEHQMKEIEN 720
  721 SESVYVYKHD QVLSLMYLFA LLMACATSGI CMGIVLSVFN GDNSDIEIDV GKTLIITVIL 780
  781 SLGISLGLIT LCLLLLFSRY TYAPIWHYAL SFAIFIMIMS TVCYGLVEIF L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle