YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49524630
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRVLLLGS GFVAQPVIDT LAATEGIEVT VACRTLANAK QLASASGSDA ISLDVTDDSA  60
   61 LDAALGQHDL VISLIPYTFH PNVVRSAIRL KKDVVTSSYI SPALRELEPE INKAGITVMN 120
  121 EIGLDPGIDH LYAVKTIDEV HRAGGKIKSF LSYCGGLPAP EDSDNPLGYK FSWSSRGVLL 180
  181 ALRNSAKYWK DGKIETISSE DLMASAKPYF IYPGYAFVCY PNRDSTLFKE LYHIPEADTV 240
  241 IRGTLRYQGF PEFVKALVDM GMLKDDENAI FSSAIPWNDA LKQYLGAKST SREDLVASID 300
  301 SKTNWKSQED RDRILSGFAW LGLFSDTKIT PRGNALDTLC ARLEELMQYE DGERDMVALQ 360
  361 HKFGIEWADG TTEVRTSTMI DYGKVGGYSS MAATVGYPVA IATKFVLNGT IKGPGLLAPY 420
  421 SPEINDPIMK ELKDKYGLYL KEKTIA

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	446	0.99