YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50285735, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLGRFTGV GARRLFSMNA MRPLRSAMPM AWRRSGNVGL KTAFMGLAFA APFSVSMLTP  60
   61 SRTIYNDTAV DIGANVLKQT GLSQAEVEVV KGERKVRLDY RGLCLGSILG VGAGVIIGKI 120
  121 SGVLAYFTVF AFLVLQWMKN RGLIDKNSSQ LRGLYRVAKV GFVDEEGNAR FVNSENLCFK 180
  181 LSFLLTFLLA AVNTQ

Type	Start	End	Confidence
Cytoplasmic	1	37	0.92
Transmembrane Helix	38	58	0.86
Non-Cytoplasmic	59	114	0.88
Transmembrane Helix	115	135	0.91
Cytoplasmic	136	195	0.87