YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50285649, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEHNEEKKC SCLSFEQLKS CAVEKTNYVI ARAQTLAVKL YRELQNPVVL VNVILGSSVV  60
   61 VTLLQSYAKY EHRFLQGKSD GQILATAGAA AAILTLDGFL SQKYYKKFDK Q

Type	Start	End	Confidence
Cytoplasmic	1	47	0.87
Transmembrane Helix	48	68	0.84
Non-Cytoplasmic	69	82	0.85
Transmembrane Helix	83	101	0.85
Cytoplasmic	102	111	0.79