YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49524259
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEQQVPLRY QDRRKTEMLR FFGATMVTLV SCRLLMGKVA PKKVDSSLLR RTNFMSNHKP  60
   61 FTGTTSEKTG KDISMGLLYT TGMITGLISM GITGSCWNND ITTVDEFRER FRLDKEYLND 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	17	0.83
Transmembrane Helix	18	37	0.71
Non-Cytoplasmic	38	76	0.73
Transmembrane Helix	77	101	0.59
Cytoplasmic	102	120	0.53