YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50284869, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGGFSTLT QAAAALALFN AVDAFDASSP GRTDLNTTEI DTGAFLGDLD VVKVPESANL  60
   61 SEYILTYAGS DKALLDEKTG YVLLNITQNY AGNDTMAKRD VKVYGYDGWY QTWHQMQTVN 120
  121 KGEWWSPWYP ISQCVSNGLN DAEASISVNF AYTYTWSLEW GLNAGPDVVG ASIGYSISDS 180
  181 VGWGGQFQCN IAPHTRGQIW YQQRVAWADI QKQDCRRENN GKVTCSPWSA FNRVNAPLKG 240
  241 ADNVHLGCSS GEDNIQCDAH FDSRLGQIFR NI

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	272	0.99