YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40019405
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPIVGKVFL VLCGSLLVTG APNTCGKLDL KTDPFTCCTI PKLLDVTIVS SCFEKFPIDK  60
   61 DAADKGAASM PKTECMSECI LNSTGIYNRR GDVDEKKLNS VFTDSLPANS PWLNVVRKAI 120
  121 KECTAKADKK DKEFQKDVAD QKKATPKGTQ VCNPEASFLV DCIHTTVFSD CPTNLRSTST 180
  181 ECDAIWNFLK NCPFSALRQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.94
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	199	0.99