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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55733197
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLSLHPGI DVRDAPLKEI KVTSSRRFIA SFNVVNTTKR DAGKYRCMIR TEGGVGISNY  60
   61 AELVVKEPPV PIAPPQLASV GATYLWIQLN ANSINGDGPT VAREVEYRTA SGSWNDRQPV 120
  121 DSTSYKIGHL DPDTEYEISV LLTRPGEGGT GSPGPALRTR TKCADPMRGP RKLEVVEVKS 180
  181 RQITIRWEPF GYNVTRCHSY NLTVHYCYQV GGQEQVREEV SWDTENSHPQ HTITNLSPYT 240
  241 NVSVKLILMN PEGRKESQEL IVQTDEDLPG AVPTESIQGS TFEEKIFLQW REPTQTYGVI 300
  301 TLYEITYKAV SSFDPEIDLS NQSGRVSKLG NETHFLFFGL YPGTTYSFTI RASTAKGFGP 360
  361 PATNQFTTKI SAPSMPAYEL ETPLNQTDNT ATVMLNSQYY FAAEFPADSL QAVQPFTIGD 420
  421 NKTYNGYWNT PLLPYKSYRI YFQAASRANG ETKIDCVQVA TKGAATPKPV PEPEKQTDHT 480
  481 VKIAGVIAGI LLFVIIFLGV VLVMKKRKLA EKRKETMSST RQEMTVMVNS MDRSYAEQGT 540
  541 NCDEAFSFMD THNLNGRSVS SPSSFTMKTN TLSTSVPNSY YPDPFVPTAI LVPINDETHT 600
  601 MASDTSSLVQ SHTYKKREPA DVPYQTGQLH PAIRVADLLQ HITQMKCAEG YGFKEEYESF 660
  661 FEGQSAPWDS AKKDENRMKN RYGNIIAYDH SRVRLQTIEG DTNSDYINGN YIDGYHRPNH 720
  721 YIATQGPMQE TIYDFWRMVW HENTASIIMV TNLVEVGRVK CCKYWPDDTE IYKDIKVTLI 780
  781 ETELLAEYVI RTFAVEKRGV HEIREIRQFH FTGWPDHGVP YHATGLLGFV RQVKSKSPPS 840
  841 AGPLVVHCSA GAGRTGCFIV IDIMLDMAER EGVVDIYNCV RELRSRRVNM VQTEEQYVFI 900
  901 HDAILEACLC GDTSVPASQV RSLYYDMNKL DPQTNSSQIK EEFRTLNMVT PTLRVEDCSI 960
  961 ALLPRNHEKN RCMDILPPDR CLPFLITIDG ESSNYINAAL MDSYKQPSAF IVTQHPLPNT1020
 1021 VKDFWRLVLD YHCTSVVMLN DVDPAQLCPQ YWPENGVHRH GPIQVEFVSA DLEEDIISRI1080
 1081 FRIYNAARPQ DGYRMVQQFQ FLGWPMYRDT PVSKRSFLKL IRQVDKWQEE YNGGEGRTVV1140
 1141 HCLNGGGRSG TFCAISIVCE MLRHQRTVDV FHAVKTLRNN KPNMVDLLDQ YKFCYEVALE1200
 1201 YLNSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle