YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160213467
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLAGPLRIV ALVVSVGLTW IVVSILLGGP GSGFPRIQQL FTSPESSVTA APRARKYKCG  60
   61 LPQPCPEEHL AFRVVSGAAN VIGPKICLED KMLMSSVKDN VGRGLNIALV NGVSGELIEA 120
  121 RAFDMWAGDV NDLLKFIRPL HEGTLVFVAS YDDPATKMNE ETRKLFSELG SRNAKELAFR 180
  181 DSWVFVGAKG VQNKSPFEQH VKNSKHTNKY EGWPEALEME GCIPRRSTAS

Type	Start	End	Confidence
Cytoplasmic	1	8	0.77
Transmembrane Helix	9	31	0.76
Non-Cytoplasmic	32	230	0.97