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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197101799
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGLFFLCL LGTAAAIPTN ARLLPDHSKP TAETVAPDNT AIPGLRAEDE ENEKETAVST  60
   61 EDHSHHKAEK SSVLKSKEES DEQSAEQGKS SSQELGLKDQ EDSDGDLSVN LEYAPTEGTL 120
  121 DIKEDMSEPQ EKKLSENSDF FAPGVSSFTD SNQRESITKR EENQEQPRNY SHHQLNRSSK 180
  181 HSQGLRDQGN QEQDPNISNG EEEEEKEPGE VGIHNDNQER KTELPREHAN SKHEEDNTQS 240
  241 DGILEESDQP TQVSKMQEDE FQQGNQEQED NSNAEMEEEN ASKVNKHIQE TEWQSQEGKT 300
  301 GLEAISNHKE IDEKTVSEAL LMEPTDGGNT MPRNHGADDD GGDDGDDGGN DGPRHSASDD 360
  361 YFIPSQAFLE AERAQSIAYH LKIEEQREKA QENENIDTSE PGEHEEAKKA ENSSNEEETS 420
  421 SEGNMRVHGV DSCMSFQCKR GHICKADQQG KPHCVCQDPV TCPPTKPLDQ VCGTDNQTYA 480
  481 SSCHLFATKC RLEGTKKGHQ LQLDYFGACK SIPTCTDFEV IQFPLRMGDW LKNILMQLYE 540
  541 ANSEHAGYLN EKQRNKVKKI YLDEKRLLAG DHPIDLLLRD FKKNYHMYVY PVHWQFSELD 600
  601 QHPMDRVLTH SELAPLRASL VPMEHCITRF FEECDPNKDK HITLKEWGHC FGIKEEDIDE 660
  661 NLLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle