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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEC63_PONPY
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQIRLKNIR KVYGRCMWYR  60
   61 LRLLKPQPNI IPTVKKIVLL AGWALFLFLA YKVSKTDREY QEYNPYEVLN LDPGATVAEI 120
  121 KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA ALTDEESRKN WEEFGNPDGP QATSFGIALP 180
  181 AWIVDQKNSI LVLLVYGLAF MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN 240
  241 MDMKRLIMVL AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK 300
  301 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIVMARNR EEREFRAPTL 360
  361 ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN HKKYKIKTIQ DLVSLKESDR 420
  421 HTLLHFLEDE KYEEVMAVLG SFPYVTMDIK SQVLDDEDSN NITVGSLVTV LVKLTRQTMA 480
  481 EVFEKEQSIC AAEEQPAEDG QGETNKNRTK GGWQQKSKGP KKTAKSKKKK KPLKKKPTPV 540
  541 LLPQSKQQKQ KQANGVVGNE AAVKEDEEEV SDKGSDSEEE ETNRDSQSEK DDGSDRDSDR 600
  601 EQDEKQNKDD EAEWQELQQS IQRKERALLE TKSKITHPVY SLYFPEEKQE WWWLYIADRK 660
  661 EQTLISMPYH VCTLKDTEEV ELKFPAPGKP GNYQYTVFLR SDSYMGLDQI KPLKLEVHEA 720
  721 KPVPENHPQW DTAIEGDEDQ EDSEGFEDSF EEEEEEEEDD D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle