YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TM14C_PONAB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDTGSVVPL HWFGFGYAAL VASGGIIGYA KAGSVPSLAA GLLFGSLASL GAYQLSQDPR  60
   61 NVWVFLATSG TLAGIMGMRF YHSGKFMPAG LIAGASLLMV AKVGVSMFNR PH

Type	Start	End	Confidence
Cytoplasmic	1	7	0.78
Transmembrane Helix	8	30	0.88
Non-Cytoplasmic	31	34	0.66
Transmembrane Helix	35	55	0.87
Cytoplasmic	56	61	0.73
Transmembrane Helix	62	81	0.91
Non-Cytoplasmic	82	86	0.68
Transmembrane Helix	87	106	0.90
Cytoplasmic	107	112	0.67