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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: K0090_PONPY
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEWASRFW LWAALLIPVA AVYEDQVGKF DWRQQYVGKL KFASLEFSPG SKKLVVATEK  60
   61 NVIAALNSRT GEILWRHVDK GTAEGAVDAM LLHGQDVITV SNGGRIMRSW ETNIGGLNWE 120
  121 ITLDTGSFQA LGLVGLQESV RYIAVLKKTT LALHHLSSGH LKWVEHLPES DSIHYQMVYS 180
  181 YGSGVVWALG VVPFSHVNIV KFNVEDGEIV QQVRVSTPWL QHLSGACGVV DEAVLVCPDP 240
  241 SSRSLQTLAL ETEWELRQIP LQSLDLEFGS GFQPRVLPTQ PNPVDASRAQ FFLHLSPSHY 300
  301 ALLQYHYGIL SLLKNFPQTA LVSFATTGEK TVAAVMACRN EVQKTSNSED GSMGSFSEKS 360
  361 SSKDSLACFN QTYTINLYLV ETGRRLLDTT TTFSLEQSGT RPERLYIQVF LKKDDSVGYR 420
  421 ALVQTEDHLL LFLQQLAGKV VLWSREESLA EVVCLEMVDL PLTGAQAELE GEFGKKAAIQ 480
  481 DGLLGMFLKR LSSQLILLQA WTSHLWKMFY DARKPRSQIK NEINIDTLAR DEFNLQKMMV 540
  541 MVTASGKLFG IESSSGTILW KQYLPSVKPD SSFKLMVQRT TAHFPHPPQC TLLVKDKESG 600
  601 MSSLYVFNPI FGKWSQVAPP VLKRPILQSL LLPVMDQDYA KVLLLIDDEY KVTAFPATRN 660
  661 VLRQLHELAP SIFFYLVDAE QGRLCGYRLR KDLTTELSWE LTIPPEVRRI VKVKGKRSSE 720
  721 HVHSQGRVMG DRSVLYKSLN PNLLAVVTES TDAHHERTFI GIFLIDGVTG RIIHSSAQKK 780
  781 AKGPVHIVHS ENWVVYQYWN TKARRNEFTV LELYEGTEQY NATAFSSLDR PQLPQVLQQS 840
  841 YIFPSSISAM EATITERGIT SRHLLIGLPS GAILSLPKAL LDPRRPEIPT EQSREENLIP 900
  901 YSPDVQIHAE RFINYNQTVS RMRGIYTAPS GLESTCLVVA YGLDIYQTRV YPSKQFDVLK 960
  961 DDYDYVLISS VLFGLVFATM ITKRLAQVKL LNRAWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle