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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55730559
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEPQQVSAL PPPPMQYIKE YTDENIQEGL APKPPPPIKD SYMMFGNQFQ CDDLIIRPLE  60
   61 SQGIERLHPM QFDHKKELRK LNMSILINFL DLLDILIRSP GNIKREEKLE DLKLLFVHVH 120
  121 HLINEYRPHQ ARETLRVMME VQKRQRLETA ERFQKHLERV IEVIQNCLAS LPDDLPHSEA 180
  181 GMRVKTEPMD ADDSNNCTGQ NEHQRENSGS SEVKYIAEVG QNAYLPCFYT PAAPGNLVPV 240
  241 CWGKGACPVF ECGSVVLRTD ERDVNHRTSS RYWLNGDFRK GDVSLTIENV TLADSGIYCC 300
  301 RIQIPGIMND EKFNLKLVIK PAKVTPAPTL QRDFTAAFPR MLTTGGHGPA ETQTPWSLRD 360
  361 INLTQIPTLD KELRDSGLAN ELRDSTIRIG IYIGAGISAG LALALIFGAL IFKWYSHSKE 420
  421 KIQNLSLISL ANLPPSGLAN AVAEGIRSEE NIYTIEENVY EVEEPNEYYC YVSSGMKWRS 480
  481 PMSITAMSAV GSNPHNLWVV ALQCHRSNHL IFELGVVFFR NYELCQLTGF GGSVHCYGAE 540
  541 FSHFQKIMTH MGIELGPALN LNRHVIASVF KPTELLNPET VNHGCMAQSR LTVTSASWVQ 600
  601 AILLPQPPEW LGLQACTTMP N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle