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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PGPS1_PONAB
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAAAAAAG PVFWRRLLGL LPGRPGLAAL LGRLSDRLGR NRDRQRRRSP WLLLAPLLSP  60
   61 AVPQVTSPPC CLCPEGVHRF QWIRNLVPEF GVSSSHVRVL SSPAESFELM KGQIRVAKRR 120
  121 VVMASLYLGT GPLEQELVDC LESTLEKSLQ AKFPSNLKVS ILLDFTRGSR GRKNSRTMLL 180
  181 PLPQRFPEQV RVSLFHTPHL RGLLRLLIPE RFNETIGLQH IKVYLFDNSV ILSGANLSDS 240
  241 YFTNRQDRYV FLQDCAEIAD FFTELVDAVG DVSLQLQGDD TVQVVDGMVH PYKGDRTEYC 300
  301 KAANKRVMDV INSARTRQQM LHAQTFHSNS LLTQEDAAAA GDRRPAPDTW IYPLIQMKPF 360
  361 EIQIDEIVTE TLLTEAERGA KVYLTTGYFN LTQAYMDLVL GTRAEYQILL ASPEVNGFFG 420
  421 AKGVVGAIPA AYVHIERQFY SEVCSLGQQE RVQLQEYWRR GWTFHAKGLW LYLAGSSLPC 480
  481 LTLIGSPNFG YRSVHRDLEA QIAIVTENEA LQQQLHQEQE QLYLRSGVVS SATFEQPSRQ 540
  541 VKLWVKMVTP LIKNFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle