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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55729997
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAIPLSLL VLLLLGPGGW CLAEHPRDTL REELVITPLP SGDVAATFQF RTRWDSELQR  60
   61 EGVSHYRLFP KALGQLISKY SLRELHLSFT QGFWRTRYWG PPFLQAPSGA ELWVWFQDTV 120
  121 TDVDKSWKEL SNVLSGIFCA SLNFIDSTNT VTPTASFKPL GLANDTDHYF LRYAVLPREV 180
  181 VCTENLTPWK KLLPCSSKAG LSVLLKADRL FHTSYHSQAV HIRPVCRNAR CTSISWELRQ 240
  241 TLSVVFDAFI TGQGKKDWSL FRMFSRTLTE PCPLASESRV YVDITNYNQD NETLEVHPSL 300
  301 TTTYQDVILG TRKTYAIYDL LDSAMINNSR NLNIQLKWKR PPENEAPPVP FLHAQRYVSG 360
  361 YGLQKGELST LLYNTHPYRA FPVLLLDTVP WYLRLYVHTL TITSKGKENK PSYIHYQPAQ 420
  421 DRLQPHLLEM LIQLPANSVT KVSIQFERAL LKWTEYTPDP NHGFYVSPSV LSALVPSMVA 480
  481 AKPVDWEESP LFNSLFPVSD GSNYFVRLYT EPLLVNLPTP DFSMPYNVIC LTCTVVAVCY 540
  541 GSFYNLLTRT FHIEEPRTGG LAKRLANLIR RARGVPLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle