YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DAD1_PONAB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASVVSVIS RFLEEYLSST PQRLKLLDAY LLYILLTGAL QFGYCLLVGT FPFNSFLSGF  60
   61 ISCVGSFILA VRLRIQINPQ NKADFQGISP ERAFADFLFA STILHLVVMN FVG

Type	Start	End	Confidence
Cytoplasmic	1	28	0.94
Transmembrane Helix	29	48	0.92
Non-Cytoplasmic	49	55	0.66
Transmembrane Helix	56	75	0.91
Cytoplasmic	76	92	0.91
Transmembrane Helix	93	112	0.78
Non-Cytoplasmic	113	113	0.85