YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55727731\|emb\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKLTEMAASS QGNFEGNFES LDLAEFAKKQ PWWRKLFGQE SGPSAEKYSV ATQLFIGGVT  60
   61 GWCTGFIFQK VGKLAATAVG GGFFLLQLAN HTGYIKVDWQ RVEKDMKKAK EQLKIRKSNQ 120
  121 IPTEVRSKAE EVVSFVKKNV LVTGGFFGGF LLGMAS

Type	Start	End	Confidence
Cytoplasmic	1	49	0.73
Transmembrane Helix	50	68	0.57
Non-Cytoplasmic	69	73	0.63
Transmembrane Helix	74	94	0.56
Cytoplasmic	95	134	0.77
Transmembrane Helix	135	155	0.59
Non-Cytoplasmic	156	156	0.79