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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRP6_PONAB
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKKKPFLG MPAPLGYVPG LGRGATGFTT RSDIGPARDA NDPVDDRHAP PGKRTVGDQM  60
   61 KKNQAADDDD EDLNDTNYDE FNGYAGSLFS SGPYEKDDEE ADAIYAALDK RMDERRKERR 120
  121 EQREKEEIEK YRMERPKIQQ QFSDLKRKLA EVTEEEWLSI PEVGDARNKR QRNPRYEKLT 180
  181 PVPDSFFAKH LQTGENHTSV DPRQTQFGGL NTPYPGGLNT PYPGGMTPGL MTPGTGELDM 240
  241 RKIGQARNTL MDMRLSQVSD SVSGQTVVDP KGYLTDLNSM IPTHGGDIND IKKARLLLKS 300
  301 VRETNPHHPP AWIASARLEE VTGKLQVARN LIMKGTEMCP KSEDVWLEAA RLQPGDTAKA 360
  361 VVAQAVRHLP QFVRIYIRAA ELETDIRAKK RVLRKALEHV PNSVRLWKAA VELEEPEDAR 420
  421 IMLSRAVECC PTSVELWLAL ARLETYENAR KVLNKARENI PTDRHIWITA AKLEEANGNT 480
  481 QMVEKIIDRA ITSLRANGVE INREQWIQDA EECDRAGSVA TCQAVMRAVI GIGIEEEDRK 540
  541 HTWMEDADSC VAHNALECAR AIYAYALQVF PSKKSVWLRA AYFGKNHGTR ESLEALLQRA 600
  601 VAHCPKAEVL WLMGAKSKWL TGDVPAARSI LALAFQANPN SEEIWLAAVK LESENDEYER 660
  661 ARRLLAKARS SAPTARVFMK SVKLEWVQDN IRAAQDLCEE ALRHYEDFPK LWMMKGQIEE 720
  721 QKEMMEKARE AYNQGLKKCP HSTPLWLLLS RLEEKIGQLT RTRAILEKSR LKNPKNPGLW 780
  781 LESVRLEYRA GLKNIANTLM AKALQECPNS GILWSEAIFL EARPQRRTKS VDALKKCEHD 840
  841 PHVLLAVAKL FWSQRKITKA REWFHRTVKI DSDLGDAWAF FYKFELQHGT EERQEEVRKR 900
  901 CESAEPRHGE LWCAVSEDIA NWQKKIGDIL RLVAGRIKNT F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle