YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CNIH_PONPY
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTFAAFCY MLALLLTATL IFFAIWHIIA FDELKTDYKN PIDQCNTLNP LVLPEYLIHA  60
   61 FFCVMFLCAA EWLTLGLNMP LLAYHIWRYM SRPVMSGPGL YDPTTIMNAD ILAYCQKEGW 120
  121 CKLAFYLLAF FYYLYGMIYV LVSS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.87
Transmembrane Helix	8	30	0.93
Non-Cytoplasmic	31	56	0.95
Transmembrane Helix	57	82	0.87
Cytoplasmic	83	122	0.87
Transmembrane Helix	123	142	0.90
Non-Cytoplasmic	143	144	0.76