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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197102832
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLQSALDF LAGPGSLGGA SGRDHSDFVG QTVELGDLRL RVRRVLAEGG FAFVYEAQDV  60
   61 GSGREYALKR LLSNEEEKNR AIIQEVCFMK KLSGHPNIVQ FCSAASIGKE ESDTGQAEFL 120
  121 LLTELCKGQL VEFLKKMESR GPLSCDTVLK IFYQTCRAVQ HMHRQKPPII HRDLKVENLL 180
  181 LSNQGTIKLC DFGSATAISH YPDYSWSAQR RALVEEEITR NTTPMYRTPE IIDLYSNFPI 240
  241 GEKQDIWALG CILYLLCFRQ HPFEDGAKLR IVNGKYSIPP HDTQYTVFHS LIRAMLQVNP 300
  301 EERLSIAEVV HQLQEIAAAR NVNPKSPITE LLEQNGGYGN AALSRGPPPP VGPAGSGYSG 360
  361 GLALAEYDQP YGGFLDILRG GTERLFTNLK DTSSKVIQSV ANYAKGDLDI SYITSRIAVM 420
  421 SFPAEGVESA LKNSIEDVRL FLDSKHPGHY AVYNLSPRTY RPSRFHNRVS ECGWAARRAP 480
  481 HLHTLYNICR NMHAWLRQDH KNVCVVHCMD GRAASAVAVC SFLCFCRLFS TAEAAVYMFS 540
  541 MKRCPPGIWP SHKRYIEYMC DMVAEEPITP HSKPILVRAV VMTPVPLFSK QRSGCRPFCE 600
  601 VYVGDERVAS TSQEYDKMRD FKIEDGKAVI PLGVTVQGDV LIVIYHARST LGGRLQAKMA 660
  661 SMKMFQIQFH TGFVPRNATT VKFAKYDLDA CDIQEKYPDL FQVNLEVEVE PRDRPSREAP 720
  721 PWENSSMRGL NPKILFSSRE EQQDILSKFG KPELPRQPGS TAQYDAGAGS PEAEPTDSDS 780
  781 PPSSSADASR FLHTLDWQEE KEAETGAENA SPKENESALM EDRDESEVSD EGGSPISSEG 840
  841 QEPRADPEPP GLAAGLVQQD LVFEVETPAV LPEPVPQEDG VDLLGLHSEV CAGPAVPPQA 900
  901 CRAPSSNTHL LSCLLGPPEA ASQGPPEDLL GEAPLLLASP APPLSVQSTP RGGPPAVADP 960
  961 FGPLLPSSGS NSQPCSNPDL FGEFLNSDSV SIPPSFPSAH SAPPPSCSAD LLHLGNLPGE1020
 1021 PSKMTASSSN PDLLGGWAAW TETAASAVAP TPATEGPLFS PGGQPAPCGS QASWTKSQNP1080
 1081 DPFADLGDLS SGLQGSPAGF PPGGFVPKTA TTPKGSSSWQ TSRPPAQGAS WPPQAKPPPK1140
 1141 ACTQPRPNYA SNFSVIGARE ERGVRTPSFA QKPKVSENDF EDLLSNQGFS SRSDKKGPKT1200
 1201 IAEMRKQDLA KDMDPLKLKL LDWIEGKERN IRALLSTLHT VLWDGEGRWT PVGMADLVAP1260
 1261 EQVKKHYRRA VLAVHPDKAA GQPYEQHAKM IFMELNDAWS EFENQGSRPL F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle