YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50198977, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQKRLLFLL AVFTFLVSSS YGRGVLKLKS DDDRPVYNHT LAVTLVEYAS AVYESDLTKL  60
   61 FTWTCERCNG LTKDFEVIEV IFDVEHCLQA YVGVAKDLNA IIIAFRGTQE HSIQNWVSDL 120
  121 FWKQLDLNYP DMPDAMVHHG FYSAYHNTTL RPAVLDAITR VKKVYGANIN IIVTGHSMGG 180
  181 AMASFCGLDL VVNEGEENVQ VMTFGQPRVG NAAFASYYSL LVPNTFRITH DRDMVPHLPP 240
  241 YYYHFPQKTY HHFPTEVWVK DFSFSNFVLF GLEKVCDNTG EDPTCSRSVR GNSISDHLRY 300
  301 FGVELKCESW RQCSIVMNQD MERYSRKDSR GNLFLSRTVP PKDVVKTSSL SKTGISSL

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	358	0.99