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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DLLA_DANRE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRHLLLLLF SILYMLLCQA SSSGVFELKL QEFLNKKGVQ GNKNCCKGGL TTSYQQCECK  60
   61 TFFRICLKHY QPNASPEPPC TYGGTVTPVL GSNSFQVPDT LPDGSFTNPI RMNFGFTWPG 120
  121 TFSLIIEALH ADSKEDLTTE NPERIISTMT TQRHLTVGED WSQDLHSVGR TELKYSYRFV 180
  181 CDEHYYGEGC SVFCRPRDDA FGHFTCGERG EIICDAGWKG QYCTEPICLP GCDEEHGFCE 240
  241 KPGECKCRVG FKGRYCDECI RYPGCLHGTC QQPWQCNCQE GWGGLFCNQD LNYCTHHKPC 300
  301 LNGATCSNTG QGSYTCSCRP GFSGASCEIE VNECTGNPCR NGGSCTDMEN TYSCTCPPGF 360
  361 YGKNCELSAM TCADGPCFNG GRCADNPDGG YFCQCPTGYA GFNCEKKIDH CSSSPCSNGA 420
  421 RCVDLVNSYL CQCPDGFTGM NCDRAGDECS MYPCQNGGTC QEGASGYMCT CPPGYTGRNC 480
  481 SSPVSRCQHN PCHNGATCHE RNNRYVCACV SGYGGRNCQF LLPDRASQIA SDVPWTAVGS 540
  541 GVLLVLLLVV ACAVVVVCVR SKVQQRRRDR EDEVANGENE TINNLTNNCH RDKDLAVSVV 600
  601 GVAPVKNINK KIDFSSDHDD LSLTTEKRSY KTRHAPADYN LVHEVKFEVK HEVKLEHAGK 660
  661 ETTMANELSD SCEDIKCQSL QDSSECTEEK RRKRLKSDAS EKSKYSESRY SESKYSESKY 720
  721 SESKYSDVSL YSESACASAC ASASTSACVD TKYKSVMVMS EEKDECVIAT EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle