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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40556948
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFAKLCGS LLVLCAALVY GQEEPCGGSF DASDAGYITT PGYPLEYPPH QNCRWVITAP  60
   61 EPSQRIVLNF NPHFELERLD CRYDFIEIRD GNSDGADLLG RHCSNIAPPA IISSGPVLHI 120
  121 KFVSDYAHQG AGFSLRYEIY KTGSDCSRNF TSPSGVIESP GFPDKYPHNL ECTFIIVVPP 180
  181 HMDVTLTFLT FDLENDPLQG SEGECKYDWL EVWDGLPQVG PLIGRHCGTK IPSEIQSSTG 240
  241 ILSLSFHTDM GVAQKWFSAH YHELSREVND NFQLAVMILG MESGRSAMTQ ISASSSFYDG 300
  301 RWSPRQARLN FDDNAWTPNE DSNKEYIQVD LHFLKVLTGI ATQGAVSKET HKSYFVTTFK 360
  361 LEVSTNGEDW MIYRFGKNHK VFHANADPSE VVLNRIPQPV LARFVRIRPQ SWKNGIALRF 420
  421 ELYGCQITDA PCSEMQGMLS GLLPDSQISA SSMRDIHGAT GAARLVASRS GWFPSPTQPV 480
  481 AGEEWLQVDL GVPKTVRGII TQGARGVDGS TSAENRAFVR KYKLAHSLNG KDLSYIIDPK 540
  541 TNLPKIFEGN THYDTPEIRR FDEIVAQFIR VYPERWSPAG IGMRMEILAC DLPESTTIPD 600
  601 TATPTIPAQE ETSTAHRTPA PTTLSSLGGL CDFEQSMCGW THDPMSDLKW SMYSSSSPSL 660
  661 DLTHGPDNFG NFLYVEASPM SEPQRARLLS PSVGPERRLV CLLFYYQLRG AGQESLRVLL 720
  721 RDDDQEETLL WTLKGDQGSM WREGRTILPQ SPKEYQVVIE GFFERGSRGH IRIDNIHMSS 780
  781 SIELEQCTQP FAAFPPEMTE RRPEDLGNNR LFKGRDRIGQ EYPFPAWTTP NPSRDPPVTR 840
  841 ISEKDNAWLY TLDPILVTII VMSSLGVLLG AVCAGLLLYC TCSYNGLSSR STTTLENYNF 900
  901 ELYDGIKHKV KINQQRCCSE A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle