YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49359169
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKKLELSE RHSVAMAASL QSAATFFQSA KISTAPSRGS AHLRSAQTVG KSFGLETSSA  60
   61 RLTCSYQSDI KDFAGKCSDA VKIAGFALAT SALVVSGASA EGAPKRLTYD EIQSKTYMEV 120
  121 KGTGTANQCP TIDGGSETFS FKPGKYAGKK FCFEPTSFTV KAESVSKNAP PEFQNTKLMT 180
  181 RLTCTLDEIE GPFEVSSDGS VNFKEEDGID YAAVTVQLPG GERVPFLFTV KQLDASGKPD 240
  241 NFTGKFLVPS YRGPSFLDPK GRGGSTGYDN AVALPAGGRG DEEELSKENV KNTAASVGEI 300
  301 TLKVTKSKPE TGEVIGVFQS LQPSDTDLGA KVPKDVKIQG VWYGQLE

Type	Start	End	Confidence
Signal Peptide	1	25	0.85
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	347	0.99